chr10:94481917:G>A Detail (hg19)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr10:94,481,917-94,481,917 |
| hg38 | chr10:92,722,160-92,722,160 View the variant detail on this assembly version. |
HGVS
[No Data.]
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Frequency
| JP | HGVD:[No Data.] |
| ToMMo:0.808 | |
| NCBN:[No Data.] | |
| NCBN(Hondo):[No Data.] | |
| NCBN(Ryukyu):[No Data.] | |
| East asia | ExAC:[No Data.] |
Prediction
ClinVar
| Clinical Significance | |
| Review star | [No Data.] |
| Show details | |
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| 0.003 | Diabetes Mellitus, Non-Insulin-Dependent | Three SNPs-rs7756992 (P = .007), rs7754840 (P = .015), and rs6931514 (P = .029)-... | BeFree | 20580033 | Detail |
| 0.421 | Diabetes Mellitus, Non-Insulin-Dependent | Three SNPs-rs7756992 (P = .007), rs7754840 (P = .015), and rs6931514 (P = .029)-... | BeFree | 20580033 | Detail |
| 0.090 | Diabetes Mellitus, Non-Insulin-Dependent | Three SNPs-rs7756992 (P = .007), rs7754840 (P = .015), and rs6931514 (P = .029)-... | BeFree | 20580033 | Detail |
| 0.214 | Diabetes Mellitus, Non-Insulin-Dependent | Three SNPs-rs7756992 (P = .007), rs7754840 (P = .015), and rs6931514 (P = .029)-... | BeFree | 20580033 | Detail |
| 0.018 | Diabetes | T2D-related variants HHEX rs7923837, TCF7L2 rs290481 and CDKAL1 rs7756992 increa... | BeFree | 24468095 | Detail |
| 0.002 | Diabetes | T2D-related variants HHEX rs7923837, TCF7L2 rs290481 and CDKAL1 rs7756992 increa... | BeFree | 24468095 | Detail |
| 0.015 | diabetes mellitus | T2D-related variants HHEX rs7923837, TCF7L2 rs290481 and CDKAL1 rs7756992 increa... | BeFree | 24468095 | Detail |
| 0.045 | diabetes mellitus | T2D-related variants HHEX rs7923837, TCF7L2 rs290481 and CDKAL1 rs7756992 increa... | BeFree | 24468095 | Detail |
| 0.011 | diabetes mellitus | T2D-related variants HHEX rs7923837, TCF7L2 rs290481 and CDKAL1 rs7756992 increa... | BeFree | 24468095 | Detail |
| 0.004 | Diabetes | T2D-related variants HHEX rs7923837, TCF7L2 rs290481 and CDKAL1 rs7756992 increa... | BeFree | 24468095 | Detail |
| 0.466 | Diabetes Mellitus, Non-Insulin-Dependent | A case-control design comprising 884 type 2 diabetic patients and 513 control su... | BeFree | 19368707 | Detail |
| 0.415 | Diabetes Mellitus, Non-Insulin-Dependent | A case-control design comprising 884 type 2 diabetic patients and 513 control su... | BeFree | 19368707 | Detail |
| 0.214 | Diabetes Mellitus, Non-Insulin-Dependent | A case-control design comprising 884 type 2 diabetic patients and 513 control su... | BeFree | 19368707 | Detail |
| 0.214 | Diabetes Mellitus, Non-Insulin-Dependent | Of the T2D-related SNPs, the G-alleles of HHEX rs7923837 (hazard ratio [HR] (95%... | BeFree | 24468095 | Detail |
| 0.002 | multiple sclerosis | [Genetic risk and a primary role for cell-mediated immune mechanisms in multiple... | GAD | 21833088 | Detail |
| <0.001 | Diabetes Mellitus, Non-Insulin-Dependent | Our data show that the major type 2 diabetes risk-conferring G allele of rs79238... | BeFree | 19933996 | Detail |
| 0.340 | Diabetes Mellitus, Non-Insulin-Dependent | Eight SNPs in five loci were found to be associated with type 2 diabetes: rs3802... | BeFree | 18477659 | Detail |
| 0.452 | Diabetes Mellitus, Non-Insulin-Dependent | Eight SNPs in five loci were found to be associated with type 2 diabetes: rs3802... | BeFree | 18477659 | Detail |
| 0.421 | Diabetes Mellitus, Non-Insulin-Dependent | In our case-control subjects, susceptibility to type 2 diabetes was replicated i... | BeFree | 19033397 | Detail |
| 0.214 | Diabetes Mellitus, Non-Insulin-Dependent | Eight SNPs in five loci were found to be associated with type 2 diabetes: rs3802... | BeFree | 18477659 | Detail |
| 0.090 | Diabetes Mellitus, Non-Insulin-Dependent | In our case-control subjects, susceptibility to type 2 diabetes was replicated i... | BeFree | 19033397 | Detail |
| 0.090 | Diabetes Mellitus, Non-Insulin-Dependent | Association to type 2 diabetes was found for rs13266634 (SLC30A8), rs7923837 (HH... | BeFree | 22923468 | Detail |
| <0.001 | gestational diabetes | The risk alleles of the SNPs rs7756992 and rs7754840 in CDKAL1; rs10811661 in th... | BeFree | 19002430 | Detail |
| 0.421 | Diabetes Mellitus, Non-Insulin-Dependent | Eight SNPs in five loci were found to be associated with type 2 diabetes: rs3802... | BeFree | 18477659 | Detail |
| <0.001 | gestational diabetes | The risk alleles of the SNPs rs7756992 and rs7754840 in CDKAL1; rs10811661 in th... | BeFree | 19002430 | Detail |
| 0.452 | Diabetes Mellitus, Non-Insulin-Dependent | In our case-control subjects, susceptibility to type 2 diabetes was replicated i... | BeFree | 19033397 | Detail |
| 0.123 | gestational diabetes | The risk alleles of the SNPs rs7756992 and rs7754840 in CDKAL1; rs10811661 in th... | BeFree | 19002430 | Detail |
| <0.001 | gestational diabetes | The risk alleles of the SNPs rs7756992 and rs7754840 in CDKAL1; rs10811661 in th... | BeFree | 19002430 | Detail |
| 0.024 | gestational diabetes | The risk alleles of the SNPs rs7756992 and rs7754840 in CDKAL1; rs10811661 in th... | BeFree | 19002430 | Detail |
| 0.042 | Diabetes Mellitus, Non-Insulin-Dependent | Association to type 2 diabetes was found for rs13266634 (SLC30A8), rs7923837 (HH... | BeFree | 22923468 | Detail |
| 0.336 | Diabetes Mellitus, Non-Insulin-Dependent | Association to type 2 diabetes was found for rs13266634 (SLC30A8), rs7923837 (HH... | BeFree | 22923468 | Detail |
| 0.340 | Diabetes Mellitus, Non-Insulin-Dependent | In our case-control subjects, susceptibility to type 2 diabetes was replicated i... | BeFree | 19033397 | Detail |
| 0.083 | Diabetes Mellitus, Non-Insulin-Dependent | Eight SNPs in five loci were found to be associated with type 2 diabetes: rs3802... | BeFree | 18477659 | Detail |
| 0.340 | Diabetes Mellitus, Non-Insulin-Dependent | Association to type 2 diabetes was found for rs13266634 (SLC30A8), rs7923837 (HH... | BeFree | 22923468 | Detail |
| 0.452 | Diabetes Mellitus, Non-Insulin-Dependent | Association to type 2 diabetes was found for rs13266634 (SLC30A8), rs7923837 (HH... | BeFree | 22923468 | Detail |
| 0.421 | Diabetes Mellitus, Non-Insulin-Dependent | In addition, we also confirmed that three SNPs (rs1111875, rs7923837 and rs50154... | BeFree | 20550665 | Detail |
| 0.214 | Diabetes Mellitus, Non-Insulin-Dependent | Our results provide clarification to the significant association of rs1111875, r... | BeFree | 23166797 | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| Three SNPs-rs7756992 (P = .007), rs7754840 (P = .015), and rs6931514 (P = .029)-of the CDKAL1, rs702... | DisGeNET | Detail |
| Three SNPs-rs7756992 (P = .007), rs7754840 (P = .015), and rs6931514 (P = .029)-of the CDKAL1, rs702... | DisGeNET | Detail |
| Three SNPs-rs7756992 (P = .007), rs7754840 (P = .015), and rs6931514 (P = .029)-of the CDKAL1, rs702... | DisGeNET | Detail |
| Three SNPs-rs7756992 (P = .007), rs7754840 (P = .015), and rs6931514 (P = .029)-of the CDKAL1, rs702... | DisGeNET | Detail |
| T2D-related variants HHEX rs7923837, TCF7L2 rs290481 and CDKAL1 rs7756992 increased cancer risk in p... | DisGeNET | Detail |
| T2D-related variants HHEX rs7923837, TCF7L2 rs290481 and CDKAL1 rs7756992 increased cancer risk in p... | DisGeNET | Detail |
| T2D-related variants HHEX rs7923837, TCF7L2 rs290481 and CDKAL1 rs7756992 increased cancer risk in p... | DisGeNET | Detail |
| T2D-related variants HHEX rs7923837, TCF7L2 rs290481 and CDKAL1 rs7756992 increased cancer risk in p... | DisGeNET | Detail |
| T2D-related variants HHEX rs7923837, TCF7L2 rs290481 and CDKAL1 rs7756992 increased cancer risk in p... | DisGeNET | Detail |
| T2D-related variants HHEX rs7923837, TCF7L2 rs290481 and CDKAL1 rs7756992 increased cancer risk in p... | DisGeNET | Detail |
| A case-control design comprising 884 type 2 diabetic patients and 513 control subjects living in the... | DisGeNET | Detail |
| A case-control design comprising 884 type 2 diabetic patients and 513 control subjects living in the... | DisGeNET | Detail |
| A case-control design comprising 884 type 2 diabetic patients and 513 control subjects living in the... | DisGeNET | Detail |
| Of the T2D-related SNPs, the G-alleles of HHEX rs7923837 (hazard ratio [HR] (95% C.I. | DisGeNET | Detail |
| [Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis.] | DisGeNET | Detail |
| Our data show that the major type 2 diabetes risk-conferring G allele of rs7923837 at the HHEX-IDE l... | DisGeNET | Detail |
| Eight SNPs in five loci were found to be associated with type 2 diabetes: rs3802177 [odds ratio (OR)... | DisGeNET | Detail |
| Eight SNPs in five loci were found to be associated with type 2 diabetes: rs3802177 [odds ratio (OR)... | DisGeNET | Detail |
| In our case-control subjects, susceptibility to type 2 diabetes was replicated in TCF7L2 (rs12255372... | DisGeNET | Detail |
| Eight SNPs in five loci were found to be associated with type 2 diabetes: rs3802177 [odds ratio (OR)... | DisGeNET | Detail |
| In our case-control subjects, susceptibility to type 2 diabetes was replicated in TCF7L2 (rs12255372... | DisGeNET | Detail |
| Association to type 2 diabetes was found for rs13266634 (SLC30A8), rs7923837 (HHEX), rs10811661 (CDK... | DisGeNET | Detail |
| The risk alleles of the SNPs rs7756992 and rs7754840 in CDKAL1; rs10811661 in the CDKN2A-CDKN2B regi... | DisGeNET | Detail |
| Eight SNPs in five loci were found to be associated with type 2 diabetes: rs3802177 [odds ratio (OR)... | DisGeNET | Detail |
| The risk alleles of the SNPs rs7756992 and rs7754840 in CDKAL1; rs10811661 in the CDKN2A-CDKN2B regi... | DisGeNET | Detail |
| In our case-control subjects, susceptibility to type 2 diabetes was replicated in TCF7L2 (rs12255372... | DisGeNET | Detail |
| The risk alleles of the SNPs rs7756992 and rs7754840 in CDKAL1; rs10811661 in the CDKN2A-CDKN2B regi... | DisGeNET | Detail |
| The risk alleles of the SNPs rs7756992 and rs7754840 in CDKAL1; rs10811661 in the CDKN2A-CDKN2B regi... | DisGeNET | Detail |
| The risk alleles of the SNPs rs7756992 and rs7754840 in CDKAL1; rs10811661 in the CDKN2A-CDKN2B regi... | DisGeNET | Detail |
| Association to type 2 diabetes was found for rs13266634 (SLC30A8), rs7923837 (HHEX), rs10811661 (CDK... | DisGeNET | Detail |
| Association to type 2 diabetes was found for rs13266634 (SLC30A8), rs7923837 (HHEX), rs10811661 (CDK... | DisGeNET | Detail |
| In our case-control subjects, susceptibility to type 2 diabetes was replicated in TCF7L2 (rs12255372... | DisGeNET | Detail |
| Eight SNPs in five loci were found to be associated with type 2 diabetes: rs3802177 [odds ratio (OR)... | DisGeNET | Detail |
| Association to type 2 diabetes was found for rs13266634 (SLC30A8), rs7923837 (HHEX), rs10811661 (CDK... | DisGeNET | Detail |
| Association to type 2 diabetes was found for rs13266634 (SLC30A8), rs7923837 (HHEX), rs10811661 (CDK... | DisGeNET | Detail |
| In addition, we also confirmed that three SNPs (rs1111875, rs7923837 and rs5015480) in HHEX , one SN... | DisGeNET | Detail |
| Our results provide clarification to the significant association of rs1111875, rs5015480 and rs79238... | DisGeNET | Detail |
- Gene
- -
- dbSNP
- rs7923837 dbSNP
- Genome
- hg19
- Position
- chr10:94,481,917-94,481,917
- Variant Type
- snv
- Reference Allele
- G
- Alternative Allele
- A
- ToMMo VCF FILTER column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- PASS
- Total VCF ID column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- rs7923837
- Allele frequency, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- 0.8082
- Allele count in genotypes, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- 13545
- Total number of alleles in called genotypes (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- 16760
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